Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Slf1Q8R3P9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slf1Q8R3P9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slf1Q8R3P9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.37■□□□□ 0.69
Slf1Q8R3P9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Slf1Q8R3P9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Slf1Q8R3P9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Slf1Q8R3P9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Slf1Q8R3P9 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.36■□□□□ 0.69
Slf1Q8R3P9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slf1Q8R3P9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slf1Q8R3P9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.36■□□□□ 0.69
Slf1Q8R3P9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.36■□□□□ 0.69
Slf1Q8R3P9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.36■□□□□ 0.69
Slf1Q8R3P9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.36■□□□□ 0.69
Slf1Q8R3P9 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.36■□□□□ 0.69
Slf1Q8R3P9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Slf1Q8R3P9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slf1Q8R3P9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.35■□□□□ 0.69
Slf1Q8R3P9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Slf1Q8R3P9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Slf1Q8R3P9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf1Q8R3P9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf1Q8R3P9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slf1Q8R3P9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.34■□□□□ 0.69
Slf1Q8R3P9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.34■□□□□ 0.69
Slf1Q8R3P9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slf1Q8R3P9 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.34■□□□□ 0.69
Slf1Q8R3P9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf1Q8R3P9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slf1Q8R3P9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.33■□□□□ 0.69
Slf1Q8R3P9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slf1Q8R3P9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slf1Q8R3P9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slf1Q8R3P9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slf1Q8R3P9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slf1Q8R3P9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Slf1Q8R3P9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.33■□□□□ 0.69
Slf1Q8R3P9 Gm15546-201ENSMUST00000122095 826 ntBASIC19.33■□□□□ 0.68
Slf1Q8R3P9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.33■□□□□ 0.68
Slf1Q8R3P9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf1Q8R3P9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slf1Q8R3P9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slf1Q8R3P9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slf1Q8R3P9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf1Q8R3P9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf1Q8R3P9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slf1Q8R3P9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slf1Q8R3P9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf1Q8R3P9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf1Q8R3P9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf1Q8R3P9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.31■□□□□ 0.68
Slf1Q8R3P9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf1Q8R3P9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf1Q8R3P9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf1Q8R3P9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slf1Q8R3P9 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slf1Q8R3P9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slf1Q8R3P9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms