Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vmn1r228Q8R2A7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vmn1r228Q8R2A7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Vmn1r228Q8R2A7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vmn1r228Q8R2A7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vmn1r228Q8R2A7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.61■□□□□ 0.25
Vmn1r228Q8R2A7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vmn1r228Q8R2A7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.59■□□□□ 0.25
Vmn1r228Q8R2A7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms