Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk3Q8K3G5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk3Q8K3G5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Vrk3Q8K3G5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Vrk3Q8K3G5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk3Q8K3G5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Vrk3Q8K3G5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Vrk3Q8K3G5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 AA386476-201ENSMUST00000098781 1665 ntBASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Vrk3Q8K3G5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vrk3Q8K3G5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Vrk3Q8K3G5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Vrk3Q8K3G5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Vrk3Q8K3G5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Vrk3Q8K3G5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vrk3Q8K3G5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Vrk3Q8K3G5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms