Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc47a1Q8K0H1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc47a1Q8K0H1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc47a1Q8K0H1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc47a1Q8K0H1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc47a1Q8K0H1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc47a1Q8K0H1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc47a1Q8K0H1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc47a1Q8K0H1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc47a1Q8K0H1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Slc47a1Q8K0H1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc47a1Q8K0H1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc47a1Q8K0H1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc47a1Q8K0H1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc47a1Q8K0H1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc47a1Q8K0H1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc47a1Q8K0H1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc47a1Q8K0H1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Gm43137-201ENSMUST00000198052 594 ntBASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Slc47a1Q8K0H1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slc47a1Q8K0H1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Slc47a1Q8K0H1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.82■□□□□ 0.6
Slc47a1Q8K0H1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc47a1Q8K0H1 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.82■□□□□ 0.6
Slc47a1Q8K0H1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc47a1Q8K0H1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc47a1Q8K0H1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc47a1Q8K0H1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc47a1Q8K0H1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc47a1Q8K0H1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc47a1Q8K0H1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc47a1Q8K0H1 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.81■□□□□ 0.6
Slc47a1Q8K0H1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc47a1Q8K0H1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc47a1Q8K0H1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc47a1Q8K0H1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc47a1Q8K0H1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc47a1Q8K0H1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc47a1Q8K0H1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc47a1Q8K0H1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc47a1Q8K0H1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc47a1Q8K0H1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc47a1Q8K0H1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms