Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.31■■□□□ 1.16
Vps53Q8CCB4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.3■■□□□ 1.16
Vps53Q8CCB4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Gm18671-201ENSMUST00000214826 683 ntBASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vps53Q8CCB4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.29■■□□□ 1.16
Vps53Q8CCB4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Vps53Q8CCB4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Vps53Q8CCB4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vps53Q8CCB4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vps53Q8CCB4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Vps53Q8CCB4 Dapk1-207ENSMUST00000226059 5009 ntBASIC22.29■■□□□ 1.16
Vps53Q8CCB4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vps53Q8CCB4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.28■■□□□ 1.16
Vps53Q8CCB4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vps53Q8CCB4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vps53Q8CCB4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vps53Q8CCB4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vps53Q8CCB4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.28■■□□□ 1.16
Vps53Q8CCB4 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.28■■□□□ 1.16
Vps53Q8CCB4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vps53Q8CCB4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Vps53Q8CCB4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.28■■□□□ 1.16
Vps53Q8CCB4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Golph3-202ENSMUST00000226517 2359 ntBASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vps53Q8CCB4 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.26■■□□□ 1.15
Vps53Q8CCB4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps53Q8CCB4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.26■■□□□ 1.15
Vps53Q8CCB4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.26■■□□□ 1.15
Vps53Q8CCB4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps53Q8CCB4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Vps53Q8CCB4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps53Q8CCB4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps53Q8CCB4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vps53Q8CCB4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.25■■□□□ 1.15
Vps53Q8CCB4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vps53Q8CCB4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Vps53Q8CCB4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vps53Q8CCB4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vps53Q8CCB4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vps53Q8CCB4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vps53Q8CCB4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vps53Q8CCB4 AV356131-201ENSMUST00000206201 750 ntBASIC22.23■■□□□ 1.15
Vps53Q8CCB4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.23■■□□□ 1.15
Vps53Q8CCB4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vps53Q8CCB4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 214.4 ms