Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lysmd4Q8CC84 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Grk6-206ENSMUST00000224995 2971 ntBASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lysmd4Q8CC84 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lysmd4Q8CC84 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Gm15820-201ENSMUST00000201566 728 ntBASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Rarb-207ENSMUST00000225921 2756 ntBASIC17.21■□□□□ 0.35
Lysmd4Q8CC84 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lysmd4Q8CC84 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lysmd4Q8CC84 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lysmd4Q8CC84 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lysmd4Q8CC84 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.19■□□□□ 0.34
Lysmd4Q8CC84 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lysmd4Q8CC84 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms