Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Aph1bQ8C7N7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Aph1bQ8C7N7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Aph1bQ8C7N7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Aph1bQ8C7N7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Aph1bQ8C7N7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Aph1bQ8C7N7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.03■□□□□ 0.64
Aph1bQ8C7N7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.03■□□□□ 0.64
Aph1bQ8C7N7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Aph1bQ8C7N7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aph1bQ8C7N7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aph1bQ8C7N7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Aph1bQ8C7N7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aph1bQ8C7N7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Aph1bQ8C7N7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Aph1bQ8C7N7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Aph1bQ8C7N7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.02■□□□□ 0.64
Aph1bQ8C7N7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.02■□□□□ 0.64
Aph1bQ8C7N7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Aph1bQ8C7N7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Aph1bQ8C7N7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Aph1bQ8C7N7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Aph1bQ8C7N7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Aph1bQ8C7N7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Gm12251-201ENSMUST00000117893 792 ntBASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Spcs1-204ENSMUST00000226782 949 ntBASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Aph1bQ8C7N7 Gm6627-201ENSMUST00000218299 2386 ntBASIC19■□□□□ 0.63
Aph1bQ8C7N7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19■□□□□ 0.63
Aph1bQ8C7N7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19■□□□□ 0.63
Aph1bQ8C7N7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Gm9847-201ENSMUST00000052528 599 ntBASIC19■□□□□ 0.63
Aph1bQ8C7N7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19■□□□□ 0.63
Aph1bQ8C7N7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19■□□□□ 0.63
Aph1bQ8C7N7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Aph1bQ8C7N7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Aph1bQ8C7N7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Aph1bQ8C7N7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Aph1bQ8C7N7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Aph1bQ8C7N7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
Aph1bQ8C7N7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Aph1bQ8C7N7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Aph1bQ8C7N7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Gm43137-201ENSMUST00000198052 594 ntBASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Aph1bQ8C7N7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms