Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rft1Q8C3B8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rft1Q8C3B8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rft1Q8C3B8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rft1Q8C3B8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rft1Q8C3B8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rft1Q8C3B8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rft1Q8C3B8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rft1Q8C3B8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rft1Q8C3B8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rft1Q8C3B8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rft1Q8C3B8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rft1Q8C3B8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rft1Q8C3B8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rft1Q8C3B8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rft1Q8C3B8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rft1Q8C3B8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rft1Q8C3B8 Gm12821-201ENSMUST00000120022 600 ntBASIC17■□□□□ 0.31
Rft1Q8C3B8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17■□□□□ 0.31
Rft1Q8C3B8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17■□□□□ 0.31
Rft1Q8C3B8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rft1Q8C3B8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rft1Q8C3B8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17■□□□□ 0.31
Rft1Q8C3B8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Rft1Q8C3B8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rft1Q8C3B8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rft1Q8C3B8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rft1Q8C3B8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17■□□□□ 0.31
Rft1Q8C3B8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Rft1Q8C3B8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rft1Q8C3B8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rft1Q8C3B8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rft1Q8C3B8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rft1Q8C3B8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Rft1Q8C3B8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rft1Q8C3B8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rft1Q8C3B8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rft1Q8C3B8 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms