Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Usp44Q8C2S0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Usp44Q8C2S0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Usp44Q8C2S0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Usp44Q8C2S0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Usp44Q8C2S0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Usp44Q8C2S0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Usp44Q8C2S0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Usp44Q8C2S0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp44Q8C2S0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp44Q8C2S0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp44Q8C2S0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.57■■□□□ 1.2
Usp44Q8C2S0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp44Q8C2S0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Usp44Q8C2S0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp44Q8C2S0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp44Q8C2S0 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.56■■□□□ 1.2
Usp44Q8C2S0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.56■■□□□ 1.2
Usp44Q8C2S0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp44Q8C2S0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp44Q8C2S0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Usp44Q8C2S0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp44Q8C2S0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Usp44Q8C2S0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp44Q8C2S0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp44Q8C2S0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp44Q8C2S0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp44Q8C2S0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.54■■□□□ 1.2
Usp44Q8C2S0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Usp44Q8C2S0 Gm38205-201ENSMUST00000192243 258 ntBASIC22.54■■□□□ 1.2
Usp44Q8C2S0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Usp44Q8C2S0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp44Q8C2S0 Iqck-206ENSMUST00000208658 2891 ntBASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Usp44Q8C2S0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Usp44Q8C2S0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms