Protein–RNA interactions for Protein: Q8BW22

Ss18l1, Calcium-responsive transactivator, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18l1Q8BW22 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ss18l1Q8BW22 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.13■□□□□ 0.33
Ss18l1Q8BW22 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ss18l1Q8BW22 Rab3c-203ENSMUST00000224180 967 ntBASIC17.13■□□□□ 0.33
Ss18l1Q8BW22 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ss18l1Q8BW22 Gm10812-201ENSMUST00000099864 546 ntBASIC17.13■□□□□ 0.33
Ss18l1Q8BW22 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ss18l1Q8BW22 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Ss18l1Q8BW22 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ss18l1Q8BW22 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ss18l1Q8BW22 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.11■□□□□ 0.33
Ss18l1Q8BW22 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ss18l1Q8BW22 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ss18l1Q8BW22 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Ss18l1Q8BW22 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ss18l1Q8BW22 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ss18l1Q8BW22 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ss18l1Q8BW22 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ss18l1Q8BW22 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ss18l1Q8BW22 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.09■□□□□ 0.33
Ss18l1Q8BW22 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ss18l1Q8BW22 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.08■□□□□ 0.33
Ss18l1Q8BW22 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ss18l1Q8BW22 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ss18l1Q8BW22 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ss18l1Q8BW22 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Mir7071-201ENSMUST00000184847 69 ntBASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ss18l1Q8BW22 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ss18l1Q8BW22 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ss18l1Q8BW22 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ss18l1Q8BW22 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ss18l1Q8BW22 Gm27275-201ENSMUST00000184318 272 ntBASIC17.06■□□□□ 0.32
Ss18l1Q8BW22 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ss18l1Q8BW22 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ss18l1Q8BW22 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ss18l1Q8BW22 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ss18l1Q8BW22 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms