Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cc2d1bQ8BRN9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Cc2d1bQ8BRN9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cc2d1bQ8BRN9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cc2d1bQ8BRN9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cc2d1bQ8BRN9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cc2d1bQ8BRN9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cc2d1bQ8BRN9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.16■□□□□ 0.98
Cc2d1bQ8BRN9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Cc2d1bQ8BRN9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Gm12821-201ENSMUST00000120022 600 ntBASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.15■□□□□ 0.98
Cc2d1bQ8BRN9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cc2d1bQ8BRN9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cc2d1bQ8BRN9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cc2d1bQ8BRN9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
Cc2d1bQ8BRN9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.14■□□□□ 0.97
Cc2d1bQ8BRN9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cc2d1bQ8BRN9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cc2d1bQ8BRN9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cc2d1bQ8BRN9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cc2d1bQ8BRN9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cc2d1bQ8BRN9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.11■□□□□ 0.97
Cc2d1bQ8BRN9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cc2d1bQ8BRN9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cc2d1bQ8BRN9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cc2d1bQ8BRN9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cc2d1bQ8BRN9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms