Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC25.63■■□□□ 1.69
Col16a1Q8BLX7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col16a1Q8BLX7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Col16a1Q8BLX7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Col16a1Q8BLX7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col16a1Q8BLX7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Col16a1Q8BLX7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Col16a1Q8BLX7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Gm13042-201ENSMUST00000119244 1955 ntBASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Col16a1Q8BLX7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Col16a1Q8BLX7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col16a1Q8BLX7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
Col16a1Q8BLX7 Gm13509-201ENSMUST00000119733 1308 ntBASIC25.6■■□□□ 1.69
Col16a1Q8BLX7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Col16a1Q8BLX7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Col16a1Q8BLX7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Col16a1Q8BLX7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Col16a1Q8BLX7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col16a1Q8BLX7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.59■■□□□ 1.69
Col16a1Q8BLX7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Col16a1Q8BLX7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col16a1Q8BLX7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Col16a1Q8BLX7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Col16a1Q8BLX7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col16a1Q8BLX7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC25.58■■□□□ 1.69
Col16a1Q8BLX7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Col16a1Q8BLX7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC25.58■■□□□ 1.69
Col16a1Q8BLX7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col16a1Q8BLX7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Col16a1Q8BLX7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col16a1Q8BLX7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col16a1Q8BLX7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC25.57■■□□□ 1.68
Col16a1Q8BLX7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Col16a1Q8BLX7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Col16a1Q8BLX7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC25.57■■□□□ 1.68
Col16a1Q8BLX7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
Col16a1Q8BLX7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col16a1Q8BLX7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Col16a1Q8BLX7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Col16a1Q8BLX7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Col16a1Q8BLX7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Col16a1Q8BLX7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Col16a1Q8BLX7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Col16a1Q8BLX7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC25.56■■□□□ 1.68
Col16a1Q8BLX7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC25.55■■□□□ 1.68
Col16a1Q8BLX7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col16a1Q8BLX7 Dio3-201ENSMUST00000097228 1449 ntBASIC25.55■■□□□ 1.68
Col16a1Q8BLX7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col16a1Q8BLX7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Col16a1Q8BLX7 Gm715-201ENSMUST00000117865 831 ntBASIC25.55■■□□□ 1.68
Col16a1Q8BLX7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Col16a1Q8BLX7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Col16a1Q8BLX7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Col16a1Q8BLX7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC25.54■■□□□ 1.68
Col16a1Q8BLX7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Col16a1Q8BLX7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col16a1Q8BLX7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Col16a1Q8BLX7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
Col16a1Q8BLX7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC25.52■■□□□ 1.68
Col16a1Q8BLX7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Col16a1Q8BLX7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Col16a1Q8BLX7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Col16a1Q8BLX7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Gm32699-201ENSMUST00000221728 1988 ntBASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Gm6576-201ENSMUST00000169678 883 ntBASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC25.51■■□□□ 1.67
Col16a1Q8BLX7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col16a1Q8BLX7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Col16a1Q8BLX7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
Col16a1Q8BLX7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC25.5■■□□□ 1.67
Col16a1Q8BLX7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col16a1Q8BLX7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col16a1Q8BLX7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Col16a1Q8BLX7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms