Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdhr3Q8BL00 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdhr3Q8BL00 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr3Q8BL00 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cdhr3Q8BL00 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.72■□□□□ 0.27
Cdhr3Q8BL00 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.72■□□□□ 0.27
Cdhr3Q8BL00 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr3Q8BL00 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr3Q8BL00 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr3Q8BL00 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdhr3Q8BL00 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cdhr3Q8BL00 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdhr3Q8BL00 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Cdhr3Q8BL00 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Serp2-204ENSMUST00000228055 705 ntBASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdhr3Q8BL00 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdhr3Q8BL00 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Cdhr3Q8BL00 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.68■□□□□ 0.26
Cdhr3Q8BL00 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.68■□□□□ 0.26
Cdhr3Q8BL00 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.68■□□□□ 0.26
Cdhr3Q8BL00 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr3Q8BL00 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Cdhr3Q8BL00 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdhr3Q8BL00 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Gm14117-201ENSMUST00000122417 843 ntBASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdhr3Q8BL00 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms