Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Scn3bQ8BHK2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn3bQ8BHK2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn3bQ8BHK2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Scn3bQ8BHK2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.83■□□□□ 0.45
Scn3bQ8BHK2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn3bQ8BHK2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.83■□□□□ 0.45
Scn3bQ8BHK2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn3bQ8BHK2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn3bQ8BHK2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn3bQ8BHK2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn3bQ8BHK2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn3bQ8BHK2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn3bQ8BHK2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn3bQ8BHK2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn3bQ8BHK2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn3bQ8BHK2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn3bQ8BHK2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.8■□□□□ 0.44
Scn3bQ8BHK2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scn3bQ8BHK2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms