Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Depdc1bQ8BH88 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.84■□□□□ 0.93
Depdc1bQ8BH88 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Depdc1bQ8BH88 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Depdc1bQ8BH88 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Depdc1bQ8BH88 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.84■□□□□ 0.93
Depdc1bQ8BH88 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.84■□□□□ 0.93
Depdc1bQ8BH88 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.84■□□□□ 0.93
Depdc1bQ8BH88 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Depdc1bQ8BH88 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Depdc1bQ8BH88 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Depdc1bQ8BH88 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.83■□□□□ 0.93
Depdc1bQ8BH88 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Depdc1bQ8BH88 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Depdc1bQ8BH88 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Depdc1bQ8BH88 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Depdc1bQ8BH88 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Depdc1bQ8BH88 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Depdc1bQ8BH88 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Depdc1bQ8BH88 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Depdc1bQ8BH88 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Depdc1bQ8BH88 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Depdc1bQ8BH88 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Depdc1bQ8BH88 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Depdc1bQ8BH88 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Depdc1bQ8BH88 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Depdc1bQ8BH88 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Depdc1bQ8BH88 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Depdc1bQ8BH88 Gm43060-201ENSMUST00000200621 289 ntBASIC20.81■□□□□ 0.92
Depdc1bQ8BH88 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Depdc1bQ8BH88 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1bQ8BH88 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1bQ8BH88 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Depdc1bQ8BH88 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
Depdc1bQ8BH88 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1bQ8BH88 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Depdc1bQ8BH88 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1bQ8BH88 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Depdc1bQ8BH88 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Depdc1bQ8BH88 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Depdc1bQ8BH88 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Depdc1bQ8BH88 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Depdc1bQ8BH88 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Depdc1bQ8BH88 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.76■□□□□ 0.91
Depdc1bQ8BH88 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
Depdc1bQ8BH88 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Depdc1bQ8BH88 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1bQ8BH88 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1bQ8BH88 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.75■□□□□ 0.91
Depdc1bQ8BH88 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.75■□□□□ 0.91
Depdc1bQ8BH88 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1bQ8BH88 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Depdc1bQ8BH88 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1bQ8BH88 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1bQ8BH88 Smad6-203ENSMUST00000179458 273 ntBASIC20.74■□□□□ 0.91
Depdc1bQ8BH88 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1bQ8BH88 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1bQ8BH88 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1bQ8BH88 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms