Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
SpidrQ8BGX7 Rab3c-203ENSMUST00000224180 967 ntBASIC22.56■■□□□ 1.2
SpidrQ8BGX7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SpidrQ8BGX7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SpidrQ8BGX7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SpidrQ8BGX7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SpidrQ8BGX7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SpidrQ8BGX7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SpidrQ8BGX7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SpidrQ8BGX7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.55■■□□□ 1.2
SpidrQ8BGX7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SpidrQ8BGX7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
SpidrQ8BGX7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SpidrQ8BGX7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.55■■□□□ 1.2
SpidrQ8BGX7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.55■■□□□ 1.2
SpidrQ8BGX7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SpidrQ8BGX7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SpidrQ8BGX7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SpidrQ8BGX7 Trmt13-210ENSMUST00000198454 880 ntBASIC22.53■■□□□ 1.2
SpidrQ8BGX7 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.53■■□□□ 1.2
SpidrQ8BGX7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SpidrQ8BGX7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SpidrQ8BGX7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SpidrQ8BGX7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SpidrQ8BGX7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SpidrQ8BGX7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SpidrQ8BGX7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SpidrQ8BGX7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.52■■□□□ 1.2
SpidrQ8BGX7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SpidrQ8BGX7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.52■■□□□ 1.2
SpidrQ8BGX7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SpidrQ8BGX7 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.52■■□□□ 1.2
SpidrQ8BGX7 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SpidrQ8BGX7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SpidrQ8BGX7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SpidrQ8BGX7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SpidrQ8BGX7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SpidrQ8BGX7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
SpidrQ8BGX7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SpidrQ8BGX7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
SpidrQ8BGX7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SpidrQ8BGX7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SpidrQ8BGX7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SpidrQ8BGX7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SpidrQ8BGX7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SpidrQ8BGX7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SpidrQ8BGX7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.49■■□□□ 1.19
SpidrQ8BGX7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SpidrQ8BGX7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
SpidrQ8BGX7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SpidrQ8BGX7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SpidrQ8BGX7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
SpidrQ8BGX7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.48■■□□□ 1.19
SpidrQ8BGX7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SpidrQ8BGX7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SpidrQ8BGX7 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.48■■□□□ 1.19
SpidrQ8BGX7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SpidrQ8BGX7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
SpidrQ8BGX7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SpidrQ8BGX7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
SpidrQ8BGX7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SpidrQ8BGX7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SpidrQ8BGX7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.46■■□□□ 1.19
SpidrQ8BGX7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms