Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim6Q8BGE7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim6Q8BGE7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trim6Q8BGE7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trim6Q8BGE7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim6Q8BGE7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.33■□□□□ 0.84
Trim6Q8BGE7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim6Q8BGE7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim6Q8BGE7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Trim6Q8BGE7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim6Q8BGE7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim6Q8BGE7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Trim6Q8BGE7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim6Q8BGE7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim6Q8BGE7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim6Q8BGE7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim6Q8BGE7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim6Q8BGE7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.3■□□□□ 0.84
Trim6Q8BGE7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim6Q8BGE7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim6Q8BGE7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim6Q8BGE7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim6Q8BGE7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim6Q8BGE7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 AA386476-201ENSMUST00000098781 1665 ntBASIC20.27■□□□□ 0.84
Trim6Q8BGE7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim6Q8BGE7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim6Q8BGE7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim6Q8BGE7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Grk6-206ENSMUST00000224995 2971 ntBASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trim6Q8BGE7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms