Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Gm40848-201ENSMUST00000221998 324 ntBASIC18.7■□□□□ 0.58
Trim50Q810I2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trim50Q810I2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim50Q810I2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim50Q810I2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim50Q810I2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Trim50Q810I2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim50Q810I2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim50Q810I2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.69■□□□□ 0.58
Trim50Q810I2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim50Q810I2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim50Q810I2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim50Q810I2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim50Q810I2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim50Q810I2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim50Q810I2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trim50Q810I2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.68■□□□□ 0.58
Trim50Q810I2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim50Q810I2 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.68■□□□□ 0.58
Trim50Q810I2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim50Q810I2 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.68■□□□□ 0.58
Trim50Q810I2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim50Q810I2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Trim50Q810I2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.67■□□□□ 0.58
Trim50Q810I2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim50Q810I2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim50Q810I2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.67■□□□□ 0.58
Trim50Q810I2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim50Q810I2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim50Q810I2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim50Q810I2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim50Q810I2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Trim50Q810I2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim50Q810I2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Trim50Q810I2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Trim50Q810I2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.66■□□□□ 0.58
Trim50Q810I2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim50Q810I2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim50Q810I2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.65■□□□□ 0.58
Trim50Q810I2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim50Q810I2 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.65■□□□□ 0.58
Trim50Q810I2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim50Q810I2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim50Q810I2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim50Q810I2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim50Q810I2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Trim50Q810I2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim50Q810I2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.65■□□□□ 0.58
Trim50Q810I2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trim50Q810I2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Trim50Q810I2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trim50Q810I2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim50Q810I2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim50Q810I2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trim50Q810I2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim50Q810I2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.64■□□□□ 0.57
Trim50Q810I2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim50Q810I2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim50Q810I2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.63■□□□□ 0.57
Trim50Q810I2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trim50Q810I2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Trim50Q810I2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim50Q810I2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.63■□□□□ 0.57
Trim50Q810I2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim50Q810I2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim50Q810I2 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms