Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Trnp1Q80ZI1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trnp1Q80ZI1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Trnp1Q80ZI1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trnp1Q80ZI1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trnp1Q80ZI1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trnp1Q80ZI1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.88■■□□□ 1.09
Trnp1Q80ZI1 Gm18666-201ENSMUST00000190039 958 ntBASIC21.88■■□□□ 1.09
Trnp1Q80ZI1 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.88■■□□□ 1.09
Trnp1Q80ZI1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.88■■□□□ 1.09
Trnp1Q80ZI1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trnp1Q80ZI1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trnp1Q80ZI1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Gm11249-201ENSMUST00000117071 859 ntBASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Gm10698-201ENSMUST00000182663 604 ntBASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trnp1Q80ZI1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trnp1Q80ZI1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Trnp1Q80ZI1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trnp1Q80ZI1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trnp1Q80ZI1 Gm15565-201ENSMUST00000118890 427 ntBASIC21.86■■□□□ 1.09
Trnp1Q80ZI1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trnp1Q80ZI1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.86■■□□□ 1.09
Trnp1Q80ZI1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trnp1Q80ZI1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
Trnp1Q80ZI1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Gm44549-201ENSMUST00000208351 577 ntBASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trnp1Q80ZI1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 Gm11643-201ENSMUST00000119578 864 ntBASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trnp1Q80ZI1 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.83■■□□□ 1.08
Trnp1Q80ZI1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.83■■□□□ 1.08
Trnp1Q80ZI1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trnp1Q80ZI1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Trnp1Q80ZI1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trnp1Q80ZI1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trnp1Q80ZI1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.81■■□□□ 1.08
Trnp1Q80ZI1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Trnp1Q80ZI1 Gm37055-201ENSMUST00000191866 133 ntBASIC21.81■■□□□ 1.08
Trnp1Q80ZI1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trnp1Q80ZI1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trnp1Q80ZI1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms