Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnrc18Q80WC3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnrc18Q80WC3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnrc18Q80WC3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnrc18Q80WC3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnrc18Q80WC3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnrc18Q80WC3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Gm7860-201ENSMUST00000121190 879 ntBASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Gm15378-201ENSMUST00000121894 207 ntBASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnrc18Q80WC3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnrc18Q80WC3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnrc18Q80WC3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnrc18Q80WC3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnrc18Q80WC3 Gm9987-201ENSMUST00000069768 567 ntBASIC19.41■□□□□ 0.7
Tnrc18Q80WC3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnrc18Q80WC3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.41■□□□□ 0.7
Tnrc18Q80WC3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnrc18Q80WC3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.4■□□□□ 0.7
Tnrc18Q80WC3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnrc18Q80WC3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnrc18Q80WC3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.4■□□□□ 0.7
Tnrc18Q80WC3 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.4■□□□□ 0.7
Tnrc18Q80WC3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnrc18Q80WC3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tnrc18Q80WC3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tnrc18Q80WC3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tnrc18Q80WC3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.39■□□□□ 0.7
Tnrc18Q80WC3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tnrc18Q80WC3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Tnrc18Q80WC3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnrc18Q80WC3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnrc18Q80WC3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnrc18Q80WC3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnrc18Q80WC3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.39■□□□□ 0.69
Tnrc18Q80WC3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Tnrc18Q80WC3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnrc18Q80WC3 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tnrc18Q80WC3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms