Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Csmd3Q80T79 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Gm26766-202ENSMUST00000227544 2347 ntBASIC13.34□□□□□ -0.27
Csmd3Q80T79 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Csmd3Q80T79 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Dmtn-209ENSMUST00000228295 2572 ntBASIC13.34□□□□□ -0.27
Csmd3Q80T79 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC13.34□□□□□ -0.27
Csmd3Q80T79 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Csmd3Q80T79 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Csmd3Q80T79 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Csmd3Q80T79 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.33□□□□□ -0.28
Csmd3Q80T79 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Csmd3Q80T79 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Csmd3Q80T79 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Csmd3Q80T79 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Csmd3Q80T79 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Csmd3Q80T79 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csmd3Q80T79 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Csmd3Q80T79 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Csmd3Q80T79 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.33□□□□□ -0.28
Csmd3Q80T79 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.32□□□□□ -0.28
Csmd3Q80T79 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.32□□□□□ -0.28
Csmd3Q80T79 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.32□□□□□ -0.28
Csmd3Q80T79 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.32□□□□□ -0.28
Csmd3Q80T79 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.32□□□□□ -0.28
Csmd3Q80T79 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Csmd3Q80T79 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Gm32051-202ENSMUST00000197905 2385 ntBASIC13.31□□□□□ -0.28
Csmd3Q80T79 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Gm37055-201ENSMUST00000191866 133 ntBASIC13.31□□□□□ -0.28
Csmd3Q80T79 Gm9987-201ENSMUST00000069768 567 ntBASIC13.31□□□□□ -0.28
Csmd3Q80T79 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Csmd3Q80T79 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.3□□□□□ -0.28
Csmd3Q80T79 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Csmd3Q80T79 Gm2559-201ENSMUST00000201323 363 ntBASIC13.29□□□□□ -0.28
Csmd3Q80T79 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.29□□□□□ -0.28
Csmd3Q80T79 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Csmd3Q80T79 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms