Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rfx4Q7TNK1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfx4Q7TNK1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rfx4Q7TNK1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
Rfx4Q7TNK1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rfx4Q7TNK1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rfx4Q7TNK1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfx4Q7TNK1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Gm13238-201ENSMUST00000117655 780 ntBASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Gm10232-201ENSMUST00000089221 720 ntBASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.38■□□□□ 0.53
Rfx4Q7TNK1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rfx4Q7TNK1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfx4Q7TNK1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.35■□□□□ 0.53
Rfx4Q7TNK1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms