Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ssx9Q6XAS3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssx9Q6XAS3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx9Q6XAS3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx9Q6XAS3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.09■□□□□ 0.65
Ssx9Q6XAS3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx9Q6XAS3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx9Q6XAS3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx9Q6XAS3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ssx9Q6XAS3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssx9Q6XAS3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssx9Q6XAS3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssx9Q6XAS3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ssx9Q6XAS3 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.08■□□□□ 0.65
Ssx9Q6XAS3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssx9Q6XAS3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssx9Q6XAS3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssx9Q6XAS3 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.06■□□□□ 0.64
Ssx9Q6XAS3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.06■□□□□ 0.64
Ssx9Q6XAS3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ssx9Q6XAS3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.06■□□□□ 0.64
Ssx9Q6XAS3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssx9Q6XAS3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssx9Q6XAS3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ssx9Q6XAS3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssx9Q6XAS3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.03■□□□□ 0.64
Ssx9Q6XAS3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms