Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sp140Q6NSQ5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Gm43173-201ENSMUST00000202246 593 ntBASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sp140Q6NSQ5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Sp140Q6NSQ5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Gm12821-201ENSMUST00000120022 600 ntBASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sp140Q6NSQ5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Smad6-203ENSMUST00000179458 273 ntBASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Gm8493-201ENSMUST00000196881 489 ntBASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sp140Q6NSQ5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Gm45417-201ENSMUST00000209533 758 ntBASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sp140Q6NSQ5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sp140Q6NSQ5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sp140Q6NSQ5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms