Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ss18Q62280 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Ss18Q62280 Gm9959-201ENSMUST00000068277 390 ntBASIC14.16□□□□□ -0.14
Ss18Q62280 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ss18Q62280 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ss18Q62280 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ss18Q62280 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Ss18Q62280 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ss18Q62280 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.15□□□□□ -0.14
Ss18Q62280 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Rps24-207ENSMUST00000224568 714 ntBASIC14.15□□□□□ -0.14
Ss18Q62280 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ss18Q62280 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.15□□□□□ -0.14
Ss18Q62280 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ss18Q62280 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ss18Q62280 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ss18Q62280 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ss18Q62280 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ss18Q62280 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ss18Q62280 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ss18Q62280 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.14□□□□□ -0.15
Ss18Q62280 Gm22238-201ENSMUST00000175222 88 ntBASIC14.14□□□□□ -0.15
Ss18Q62280 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.14□□□□□ -0.15
Ss18Q62280 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ss18Q62280 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ss18Q62280 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ss18Q62280 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ss18Q62280 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.13□□□□□ -0.15
Ss18Q62280 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.13□□□□□ -0.15
Ss18Q62280 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ss18Q62280 Golph3-205ENSMUST00000228671 2842 ntBASIC14.13□□□□□ -0.15
Ss18Q62280 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ss18Q62280 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ss18Q62280 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.12□□□□□ -0.15
Ss18Q62280 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Ss18Q62280 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.12□□□□□ -0.15
Ss18Q62280 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.12□□□□□ -0.15
Ss18Q62280 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.12□□□□□ -0.15
Ss18Q62280 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ss18Q62280 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.12□□□□□ -0.15
Ss18Q62280 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ss18Q62280 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Ss18Q62280 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ss18Q62280 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.11□□□□□ -0.15
Ss18Q62280 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.11□□□□□ -0.15
Ss18Q62280 Gm45102-201ENSMUST00000207427 857 ntBASIC14.11□□□□□ -0.15
Ss18Q62280 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.11□□□□□ -0.15
Ss18Q62280 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ss18Q62280 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ss18Q62280 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ss18Q62280 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ss18Q62280 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ss18Q62280 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ss18Q62280 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms