Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.61■□□□□ 0.41
Clcn4Q61418 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn4Q61418 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn4Q61418 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn4Q61418 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn4Q61418 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn4Q61418 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.6■□□□□ 0.41
Clcn4Q61418 Gm43137-201ENSMUST00000198052 594 ntBASIC17.6■□□□□ 0.41
Clcn4Q61418 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clcn4Q61418 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn4Q61418 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn4Q61418 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn4Q61418 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn4Q61418 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Clcn4Q61418 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Clcn4Q61418 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn4Q61418 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.59■□□□□ 0.41
Clcn4Q61418 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.59■□□□□ 0.41
Clcn4Q61418 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn4Q61418 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Clcn4Q61418 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn4Q61418 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn4Q61418 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn4Q61418 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn4Q61418 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Clcn4Q61418 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.58■□□□□ 0.41
Clcn4Q61418 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn4Q61418 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn4Q61418 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.58■□□□□ 0.4
Clcn4Q61418 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Clcn4Q61418 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Clcn4Q61418 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn4Q61418 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn4Q61418 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn4Q61418 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn4Q61418 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn4Q61418 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Clcn4Q61418 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clcn4Q61418 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn4Q61418 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn4Q61418 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Clcn4Q61418 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.57■□□□□ 0.4
Clcn4Q61418 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.57■□□□□ 0.4
Clcn4Q61418 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Clcn4Q61418 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn4Q61418 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn4Q61418 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Clcn4Q61418 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn4Q61418 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn4Q61418 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clcn4Q61418 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn4Q61418 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn4Q61418 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clcn4Q61418 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clcn4Q61418 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Clcn4Q61418 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
Clcn4Q61418 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.56■□□□□ 0.4
Clcn4Q61418 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Clcn4Q61418 Gm6139-201ENSMUST00000079261 882 ntBASIC17.56■□□□□ 0.4
Clcn4Q61418 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.56■□□□□ 0.4
Clcn4Q61418 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clcn4Q61418 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn4Q61418 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clcn4Q61418 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn4Q61418 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn4Q61418 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn4Q61418 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clcn4Q61418 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn4Q61418 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.55■□□□□ 0.4
Clcn4Q61418 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn4Q61418 Mir7075-201ENSMUST00000184187 82 ntBASIC17.55■□□□□ 0.4
Clcn4Q61418 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.55■□□□□ 0.4
Clcn4Q61418 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn4Q61418 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
Clcn4Q61418 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clcn4Q61418 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.54■□□□□ 0.4
Clcn4Q61418 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.54■□□□□ 0.4
Clcn4Q61418 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clcn4Q61418 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn4Q61418 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn4Q61418 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn4Q61418 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.53■□□□□ 0.4
Clcn4Q61418 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Clcn4Q61418 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn4Q61418 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Clcn4Q61418 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn4Q61418 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn4Q61418 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.53■□□□□ 0.4
Clcn4Q61418 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn4Q61418 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Clcn4Q61418 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms