Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Gm12896-201ENSMUST00000118430 226 ntBASIC16.3■□□□□ 0.2
Hcfc1Q61191 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1Q61191 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Hcfc1Q61191 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.29■□□□□ 0.2
Hcfc1Q61191 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.29■□□□□ 0.2
Hcfc1Q61191 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hcfc1Q61191 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1Q61191 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.28■□□□□ 0.2
Hcfc1Q61191 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Gm2559-201ENSMUST00000201323 363 ntBASIC16.28■□□□□ 0.2
Hcfc1Q61191 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.28■□□□□ 0.2
Hcfc1Q61191 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1Q61191 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcfc1Q61191 Gm7977-201ENSMUST00000193787 748 ntBASIC16.27■□□□□ 0.2
Hcfc1Q61191 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcfc1Q61191 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hcfc1Q61191 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hcfc1Q61191 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hcfc1Q61191 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcfc1Q61191 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.26■□□□□ 0.19
Hcfc1Q61191 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.26■□□□□ 0.19
Hcfc1Q61191 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcfc1Q61191 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcfc1Q61191 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcfc1Q61191 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcfc1Q61191 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcfc1Q61191 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.25■□□□□ 0.19
Hcfc1Q61191 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcfc1Q61191 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Gm6576-201ENSMUST00000169678 883 ntBASIC16.24■□□□□ 0.19
Hcfc1Q61191 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcfc1Q61191 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hcfc1Q61191 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Gm13836-201ENSMUST00000121159 501 ntBASIC16.23■□□□□ 0.19
Hcfc1Q61191 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hcfc1Q61191 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hcfc1Q61191 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms