Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Gm6659-201ENSMUST00000174752 547 ntBASIC19.31■□□□□ 0.68
Col12a1Q60847 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.31■□□□□ 0.68
Col12a1Q60847 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col12a1Q60847 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Col12a1Q60847 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Col12a1Q60847 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.3■□□□□ 0.68
Col12a1Q60847 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.3■□□□□ 0.68
Col12a1Q60847 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col12a1Q60847 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col12a1Q60847 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col12a1Q60847 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Col12a1Q60847 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Col12a1Q60847 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.29■□□□□ 0.68
Col12a1Q60847 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.29■□□□□ 0.68
Col12a1Q60847 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col12a1Q60847 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col12a1Q60847 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Col12a1Q60847 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Col12a1Q60847 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.28■□□□□ 0.68
Col12a1Q60847 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col12a1Q60847 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Col12a1Q60847 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.27■□□□□ 0.68
Col12a1Q60847 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col12a1Q60847 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col12a1Q60847 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.27■□□□□ 0.68
Col12a1Q60847 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col12a1Q60847 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Col12a1Q60847 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col12a1Q60847 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col12a1Q60847 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Col12a1Q60847 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Col12a1Q60847 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col12a1Q60847 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col12a1Q60847 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col12a1Q60847 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col12a1Q60847 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col12a1Q60847 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col12a1Q60847 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col12a1Q60847 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col12a1Q60847 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Col12a1Q60847 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Col12a1Q60847 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col12a1Q60847 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.26■□□□□ 0.67
Col12a1Q60847 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Col12a1Q60847 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col12a1Q60847 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.25■□□□□ 0.67
Col12a1Q60847 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Col12a1Q60847 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.25■□□□□ 0.67
Col12a1Q60847 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Col12a1Q60847 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col12a1Q60847 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col12a1Q60847 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col12a1Q60847 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col12a1Q60847 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
Col12a1Q60847 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.24■□□□□ 0.67
Col12a1Q60847 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col12a1Q60847 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col12a1Q60847 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col12a1Q60847 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col12a1Q60847 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms