Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tnfaip3Q60769 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 AV356131-201ENSMUST00000206201 750 ntBASIC18.03■□□□□ 0.48
Tnfaip3Q60769 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tnfaip3Q60769 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfaip3Q60769 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.02■□□□□ 0.48
Tnfaip3Q60769 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfaip3Q60769 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.02■□□□□ 0.48
Tnfaip3Q60769 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
Tnfaip3Q60769 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfaip3Q60769 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tnfaip3Q60769 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfaip3Q60769 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tnfaip3Q60769 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Gm27405-201ENSMUST00000184201 112 ntBASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tnfaip3Q60769 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip3Q60769 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18■□□□□ 0.47
Tnfaip3Q60769 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18■□□□□ 0.47
Tnfaip3Q60769 Gm7291-201ENSMUST00000199147 382 ntBASIC18■□□□□ 0.47
Tnfaip3Q60769 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip3Q60769 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip3Q60769 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip3Q60769 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip3Q60769 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18■□□□□ 0.47
Tnfaip3Q60769 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfaip3Q60769 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tnfaip3Q60769 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.99■□□□□ 0.47
Tnfaip3Q60769 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.99■□□□□ 0.47
Tnfaip3Q60769 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfaip3Q60769 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfaip3Q60769 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfaip3Q60769 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfaip3Q60769 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tnfaip3Q60769 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfaip3Q60769 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Tnfaip3Q60769 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tnfaip3Q60769 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tnfaip3Q60769 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.95■□□□□ 0.46
Tnfaip3Q60769 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.95■□□□□ 0.46
Tnfaip3Q60769 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip3Q60769 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip3Q60769 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip3Q60769 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tnfaip3Q60769 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip3Q60769 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tnfaip3Q60769 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip3Q60769 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfaip3Q60769 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms