Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ubr3Q5U430 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ubr3Q5U430 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
Ubr3Q5U430 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ubr3Q5U430 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.75■■□□□ 1.39
Ubr3Q5U430 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ubr3Q5U430 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.75■■□□□ 1.39
Ubr3Q5U430 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ubr3Q5U430 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ubr3Q5U430 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.75■■□□□ 1.39
Ubr3Q5U430 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.74■■□□□ 1.39
Ubr3Q5U430 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ubr3Q5U430 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.74■■□□□ 1.39
Ubr3Q5U430 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ubr3Q5U430 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.74■■□□□ 1.39
Ubr3Q5U430 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ubr3Q5U430 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ubr3Q5U430 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ubr3Q5U430 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ubr3Q5U430 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ubr3Q5U430 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Ubr3Q5U430 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.73■■□□□ 1.39
Ubr3Q5U430 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ubr3Q5U430 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ubr3Q5U430 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC23.73■■□□□ 1.39
Ubr3Q5U430 Mir5122-201ENSMUST00000175004 89 ntBASIC23.73■■□□□ 1.39
Ubr3Q5U430 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.73■■□□□ 1.39
Ubr3Q5U430 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
Ubr3Q5U430 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.73■■□□□ 1.39
Ubr3Q5U430 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr3Q5U430 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr3Q5U430 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr3Q5U430 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.72■■□□□ 1.39
Ubr3Q5U430 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr3Q5U430 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr3Q5U430 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr3Q5U430 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr3Q5U430 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ubr3Q5U430 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr3Q5U430 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr3Q5U430 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr3Q5U430 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.71■■□□□ 1.39
Ubr3Q5U430 Gm44549-201ENSMUST00000208351 577 ntBASIC23.71■■□□□ 1.39
Ubr3Q5U430 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr3Q5U430 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr3Q5U430 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr3Q5U430 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
Ubr3Q5U430 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
Ubr3Q5U430 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ubr3Q5U430 AC153881.2-201ENSMUST00000214877 204 ntBASIC23.7■■□□□ 1.39
Ubr3Q5U430 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ubr3Q5U430 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ubr3Q5U430 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr3Q5U430 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr3Q5U430 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.7■■□□□ 1.38
Ubr3Q5U430 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr3Q5U430 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr3Q5U430 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr3Q5U430 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ubr3Q5U430 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.7■■□□□ 1.38
Ubr3Q5U430 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr3Q5U430 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC23.69■■□□□ 1.38
Ubr3Q5U430 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.69■■□□□ 1.38
Ubr3Q5U430 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr3Q5U430 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr3Q5U430 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ubr3Q5U430 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
Ubr3Q5U430 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.69■■□□□ 1.38
Ubr3Q5U430 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.68■■□□□ 1.38
Ubr3Q5U430 Nrn1-203ENSMUST00000223611 1443 ntBASIC23.68■■□□□ 1.38
Ubr3Q5U430 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Ubr3Q5U430 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC23.68■■□□□ 1.38
Ubr3Q5U430 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr3Q5U430 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr3Q5U430 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Ubr3Q5U430 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr3Q5U430 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ubr3Q5U430 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ubr3Q5U430 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ubr3Q5U430 Gm18666-201ENSMUST00000190039 958 ntBASIC23.67■■□□□ 1.38
Ubr3Q5U430 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ubr3Q5U430 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
Ubr3Q5U430 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ubr3Q5U430 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.66■■□□□ 1.38
Ubr3Q5U430 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ubr3Q5U430 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Ubr3Q5U430 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23.66■■□□□ 1.38
Ubr3Q5U430 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ubr3Q5U430 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms