Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Gm38205-201ENSMUST00000192243 258 ntBASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6d-4Q5R1I0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6d-4Q5R1I0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6d-4Q5R1I0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6d-4Q5R1I0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6d-4Q5R1I0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Gm7860-201ENSMUST00000121190 879 ntBASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Gm7514-201ENSMUST00000209475 934 ntBASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6d-4Q5R1I0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms