Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav5d-4Q5R1F6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Gm27454-201ENSMUST00000185090 204 ntBASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.46■□□□□ 0.23
Trav5d-4Q5R1F6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav5d-4Q5R1F6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Trav5d-4Q5R1F6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav5d-4Q5R1F6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav5d-4Q5R1F6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Gm8493-201ENSMUST00000196881 489 ntBASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav5d-4Q5R1F6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5d-4Q5R1F6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5d-4Q5R1F6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5d-4Q5R1F6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5d-4Q5R1F6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5d-4Q5R1F6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5d-4Q5R1F6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5d-4Q5R1F6 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.42■□□□□ 0.22
Trav5d-4Q5R1F6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav5d-4Q5R1F6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5d-4Q5R1F6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5d-4Q5R1F6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5d-4Q5R1F6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav5d-4Q5R1F6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5d-4Q5R1F6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav5d-4Q5R1F6 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms