Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm15565-201ENSMUST00000118890 427 ntBASIC33.54■■■□□ 2.96
Trim41Q5NCC3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Trim41Q5NCC3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC33.54■■■□□ 2.96
Trim41Q5NCC3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Trim41Q5NCC3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Trim41Q5NCC3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Gm7290-201ENSMUST00000104990 617 ntBASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Gm11643-201ENSMUST00000119578 864 ntBASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Gm12918-201ENSMUST00000120234 636 ntBASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Gm15710-201ENSMUST00000121821 636 ntBASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Gm6420-201ENSMUST00000193885 723 ntBASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Gm5075-201ENSMUST00000196916 622 ntBASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC33.53■■■□□ 2.96
Trim41Q5NCC3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC33.52■■■□□ 2.96
Trim41Q5NCC3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
Trim41Q5NCC3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Trim41Q5NCC3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Trim41Q5NCC3 Gm6277-202ENSMUST00000224036 2779 ntBASIC33.52■■■□□ 2.96
Trim41Q5NCC3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC33.52■■■□□ 2.96
Trim41Q5NCC3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC33.51■■■□□ 2.96
Trim41Q5NCC3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Trim41Q5NCC3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC33.51■■■□□ 2.95
Trim41Q5NCC3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC33.51■■■□□ 2.95
Trim41Q5NCC3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC33.51■■■□□ 2.95
Trim41Q5NCC3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Trim41Q5NCC3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC33.5■■■□□ 2.95
Trim41Q5NCC3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Trim41Q5NCC3 Gm6365-201ENSMUST00000054711 744 ntBASIC33.5■■■□□ 2.95
Trim41Q5NCC3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC33.5■■■□□ 2.95
Trim41Q5NCC3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC33.49■■■□□ 2.95
Trim41Q5NCC3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC33.49■■■□□ 2.95
Trim41Q5NCC3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC33.49■■■□□ 2.95
Trim41Q5NCC3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC33.49■■■□□ 2.95
Trim41Q5NCC3 Gm21362-201ENSMUST00000194272 928 ntBASIC33.49■■■□□ 2.95
Trim41Q5NCC3 Gm10459-201ENSMUST00000202708 1155 ntBASIC33.49■■■□□ 2.95
Trim41Q5NCC3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Trim41Q5NCC3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC33.49■■■□□ 2.95
Trim41Q5NCC3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Trim41Q5NCC3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Trim41Q5NCC3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Trim41Q5NCC3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Trim41Q5NCC3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Trim41Q5NCC3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Trim41Q5NCC3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
Trim41Q5NCC3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC33.47■■■□□ 2.95
Trim41Q5NCC3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC33.47■■■□□ 2.95
Trim41Q5NCC3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Trim41Q5NCC3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Trim41Q5NCC3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
Trim41Q5NCC3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC33.46■■■□□ 2.95
Trim41Q5NCC3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Trim41Q5NCC3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC33.45■■■□□ 2.95
Trim41Q5NCC3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Trim41Q5NCC3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC33.45■■■□□ 2.95
Trim41Q5NCC3 Gm6802-201ENSMUST00000167843 1983 ntBASIC33.45■■■□□ 2.94
Trim41Q5NCC3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
Trim41Q5NCC3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Trim41Q5NCC3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC33.44■■■□□ 2.94
Trim41Q5NCC3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Trim41Q5NCC3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
Trim41Q5NCC3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Trim41Q5NCC3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC33.44■■■□□ 2.94
Trim41Q5NCC3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC33.44■■■□□ 2.94
Trim41Q5NCC3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Trim41Q5NCC3 Gm7860-201ENSMUST00000121190 879 ntBASIC33.43■■■□□ 2.94
Trim41Q5NCC3 Gm6576-201ENSMUST00000169678 883 ntBASIC33.43■■■□□ 2.94
Trim41Q5NCC3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC33.43■■■□□ 2.94
Trim41Q5NCC3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC33.43■■■□□ 2.94
Trim41Q5NCC3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
Trim41Q5NCC3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Trim41Q5NCC3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Trim41Q5NCC3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC33.42■■■□□ 2.94
Trim41Q5NCC3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC33.41■■■□□ 2.94
Trim41Q5NCC3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC33.41■■■□□ 2.94
Trim41Q5NCC3 Gm25925-201ENSMUST00000158314 306 ntBASIC33.41■■■□□ 2.94
Trim41Q5NCC3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC33.41■■■□□ 2.94
Trim41Q5NCC3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Trim41Q5NCC3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Trim41Q5NCC3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Trim41Q5NCC3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Trim41Q5NCC3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Trim41Q5NCC3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC33.4■■■□□ 2.94
Trim41Q5NCC3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Trim41Q5NCC3 Arhgef33-211ENSMUST00000225658 473 ntBASIC33.4■■■□□ 2.94
Trim41Q5NCC3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Trim41Q5NCC3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC33.4■■■□□ 2.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms