Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps41Q5KU39 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
Vps41Q5KU39 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.99■□□□□ 0.79
Vps41Q5KU39 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.99■□□□□ 0.79
Vps41Q5KU39 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps41Q5KU39 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.99■□□□□ 0.79
Vps41Q5KU39 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.99■□□□□ 0.79
Vps41Q5KU39 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vps41Q5KU39 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps41Q5KU39 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Vps41Q5KU39 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vps41Q5KU39 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Vps41Q5KU39 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps41Q5KU39 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps41Q5KU39 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps41Q5KU39 Gm15546-201ENSMUST00000122095 826 ntBASIC19.98■□□□□ 0.79
Vps41Q5KU39 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.98■□□□□ 0.79
Vps41Q5KU39 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.98■□□□□ 0.79
Vps41Q5KU39 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps41Q5KU39 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Vps41Q5KU39 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps41Q5KU39 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps41Q5KU39 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps41Q5KU39 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps41Q5KU39 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
Vps41Q5KU39 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.96■□□□□ 0.79
Vps41Q5KU39 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.96■□□□□ 0.79
Vps41Q5KU39 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.96■□□□□ 0.79
Vps41Q5KU39 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps41Q5KU39 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.96■□□□□ 0.79
Vps41Q5KU39 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps41Q5KU39 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps41Q5KU39 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vps41Q5KU39 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vps41Q5KU39 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps41Q5KU39 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.95■□□□□ 0.78
Vps41Q5KU39 Gm22238-201ENSMUST00000175222 88 ntBASIC19.95■□□□□ 0.78
Vps41Q5KU39 Gm9959-201ENSMUST00000068277 390 ntBASIC19.95■□□□□ 0.78
Vps41Q5KU39 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps41Q5KU39 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps41Q5KU39 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps41Q5KU39 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Vps41Q5KU39 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps41Q5KU39 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps41Q5KU39 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps41Q5KU39 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps41Q5KU39 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.93■□□□□ 0.78
Vps41Q5KU39 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps41Q5KU39 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps41Q5KU39 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.93■□□□□ 0.78
Vps41Q5KU39 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.93■□□□□ 0.78
Vps41Q5KU39 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vps41Q5KU39 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps41Q5KU39 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Vps41Q5KU39 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Vps41Q5KU39 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Vps41Q5KU39 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
Vps41Q5KU39 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Vps41Q5KU39 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Vps41Q5KU39 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps41Q5KU39 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Vps41Q5KU39 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps41Q5KU39 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps41Q5KU39 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps41Q5KU39 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.92■□□□□ 0.78
Vps41Q5KU39 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vps41Q5KU39 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Vps41Q5KU39 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.91■□□□□ 0.78
Vps41Q5KU39 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vps41Q5KU39 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vps41Q5KU39 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms