Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Gm37055-201ENSMUST00000191866 133 ntBASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Defb28Q3V2L0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Defb28Q3V2L0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Defb28Q3V2L0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Defb28Q3V2L0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Defb28Q3V2L0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Defb28Q3V2L0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Defb28Q3V2L0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.58■□□□□ 0.56
Defb28Q3V2L0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.58■□□□□ 0.56
Defb28Q3V2L0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Defb28Q3V2L0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.58■□□□□ 0.56
Defb28Q3V2L0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Defb28Q3V2L0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.57■□□□□ 0.56
Defb28Q3V2L0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Defb28Q3V2L0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Gm10698-201ENSMUST00000182663 604 ntBASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Defb28Q3V2L0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Gm11249-201ENSMUST00000117071 859 ntBASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Gm15378-201ENSMUST00000121894 207 ntBASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.54■□□□□ 0.56
Defb28Q3V2L0 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Gm9987-201ENSMUST00000069768 567 ntBASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.54■□□□□ 0.56
Defb28Q3V2L0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Defb28Q3V2L0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb28Q3V2L0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb28Q3V2L0 Mir1199-201ENSMUST00000117015 119 ntBASIC18.52■□□□□ 0.56
Defb28Q3V2L0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb28Q3V2L0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.52■□□□□ 0.56
Defb28Q3V2L0 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.52■□□□□ 0.56
Defb28Q3V2L0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.52■□□□□ 0.56
Defb28Q3V2L0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb28Q3V2L0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Defb28Q3V2L0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Defb28Q3V2L0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Defb28Q3V2L0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms