Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Carmil3Q3UFQ8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Carmil3Q3UFQ8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Carmil3Q3UFQ8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Carmil3Q3UFQ8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Carmil3Q3UFQ8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Carmil3Q3UFQ8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Carmil3Q3UFQ8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.29■■□□□ 1.32
Carmil3Q3UFQ8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Carmil3Q3UFQ8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Carmil3Q3UFQ8 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.28■■□□□ 1.32
Carmil3Q3UFQ8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.28■■□□□ 1.32
Carmil3Q3UFQ8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Carmil3Q3UFQ8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Carmil3Q3UFQ8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Carmil3Q3UFQ8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Carmil3Q3UFQ8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Carmil3Q3UFQ8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Carmil3Q3UFQ8 Gm22240-201ENSMUST00000175225 82 ntBASIC23.27■■□□□ 1.31
Carmil3Q3UFQ8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
Carmil3Q3UFQ8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Carmil3Q3UFQ8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Carmil3Q3UFQ8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Carmil3Q3UFQ8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.26■■□□□ 1.31
Carmil3Q3UFQ8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.26■■□□□ 1.31
Carmil3Q3UFQ8 Gm8520-201ENSMUST00000186517 868 ntBASIC23.26■■□□□ 1.31
Carmil3Q3UFQ8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
Carmil3Q3UFQ8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Carmil3Q3UFQ8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Carmil3Q3UFQ8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Carmil3Q3UFQ8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Carmil3Q3UFQ8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Carmil3Q3UFQ8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Carmil3Q3UFQ8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Carmil3Q3UFQ8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Carmil3Q3UFQ8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 Gm20049-201ENSMUST00000219950 730 ntBASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Carmil3Q3UFQ8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.23■■□□□ 1.31
Carmil3Q3UFQ8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Carmil3Q3UFQ8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Carmil3Q3UFQ8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Carmil3Q3UFQ8 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.23■■□□□ 1.31
Carmil3Q3UFQ8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Carmil3Q3UFQ8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Carmil3Q3UFQ8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Carmil3Q3UFQ8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Carmil3Q3UFQ8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Carmil3Q3UFQ8 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.22■■□□□ 1.31
Carmil3Q3UFQ8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Carmil3Q3UFQ8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Gm7860-201ENSMUST00000121190 879 ntBASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Gm26524-201ENSMUST00000192339 390 ntBASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Carmil3Q3UFQ8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Carmil3Q3UFQ8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Carmil3Q3UFQ8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Carmil3Q3UFQ8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Carmil3Q3UFQ8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Carmil3Q3UFQ8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Carmil3Q3UFQ8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.19■■□□□ 1.3
Carmil3Q3UFQ8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.19■■□□□ 1.3
Carmil3Q3UFQ8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Carmil3Q3UFQ8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Carmil3Q3UFQ8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Carmil3Q3UFQ8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Carmil3Q3UFQ8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Carmil3Q3UFQ8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Carmil3Q3UFQ8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Carmil3Q3UFQ8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
Carmil3Q3UFQ8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.18■■□□□ 1.3
Carmil3Q3UFQ8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Carmil3Q3UFQ8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Carmil3Q3UFQ8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms