Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q3KNL4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q3KNL4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Q3KNL4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q3KNL4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q3KNL4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q3KNL4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Q3KNL4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q3KNL4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.85■□□□□ 0.61
Q3KNL4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3KNL4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Q3KNL4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Q3KNL4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3KNL4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.84■□□□□ 0.61
Q3KNL4 Golgb1-201ENSMUST00000023534 498 ntBASIC18.84■□□□□ 0.61
Q3KNL4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3KNL4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3KNL4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3KNL4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q3KNL4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q3KNL4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q3KNL4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q3KNL4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Q3KNL4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Q3KNL4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.83■□□□□ 0.6
Q3KNL4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q3KNL4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q3KNL4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Q3KNL4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Q3KNL4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q3KNL4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q3KNL4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.82■□□□□ 0.6
Q3KNL4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q3KNL4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Q3KNL4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q3KNL4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q3KNL4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Q3KNL4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q3KNL4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q3KNL4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q3KNL4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q3KNL4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
Q3KNL4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
Q3KNL4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q3KNL4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q3KNL4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Q3KNL4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q3KNL4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Q3KNL4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Q3KNL4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.8■□□□□ 0.6
Q3KNL4 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.8■□□□□ 0.6
Q3KNL4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.8■□□□□ 0.6
Q3KNL4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Q3KNL4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Q3KNL4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Q3KNL4 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Q3KNL4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
Q3KNL4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q3KNL4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Q3KNL4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q3KNL4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q3KNL4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q3KNL4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q3KNL4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q3KNL4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q3KNL4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Q3KNL4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Q3KNL4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Q3KNL4 Gm12922-201ENSMUST00000120626 809 ntBASIC18.78■□□□□ 0.6
Q3KNL4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q3KNL4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q3KNL4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Q3KNL4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q3KNL4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q3KNL4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.77■□□□□ 0.6
Q3KNL4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Q3KNL4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.77■□□□□ 0.6
Q3KNL4 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.77■□□□□ 0.6
Q3KNL4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Q3KNL4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Q3KNL4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Q3KNL4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.76■□□□□ 0.59
Q3KNL4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Q3KNL4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q3KNL4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q3KNL4 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.76■□□□□ 0.59
Q3KNL4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q3KNL4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q3KNL4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.76■□□□□ 0.59
Q3KNL4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms