Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chd8Q09XV5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd8Q09XV5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.45■□□□□ 0.38
Chd8Q09XV5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chd8Q09XV5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Chd8Q09XV5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.44■□□□□ 0.38
Chd8Q09XV5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Chd8Q09XV5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd8Q09XV5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd8Q09XV5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
Chd8Q09XV5 Gm18032-201ENSMUST00000222541 538 ntBASIC17.44■□□□□ 0.38
Chd8Q09XV5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.44■□□□□ 0.38
Chd8Q09XV5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chd8Q09XV5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.43■□□□□ 0.38
Chd8Q09XV5 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.43■□□□□ 0.38
Chd8Q09XV5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd8Q09XV5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd8Q09XV5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chd8Q09XV5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd8Q09XV5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd8Q09XV5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.42■□□□□ 0.38
Chd8Q09XV5 Gm44549-201ENSMUST00000208351 577 ntBASIC17.42■□□□□ 0.38
Chd8Q09XV5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Chd8Q09XV5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd8Q09XV5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd8Q09XV5 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.41■□□□□ 0.38
Chd8Q09XV5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd8Q09XV5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.41■□□□□ 0.38
Chd8Q09XV5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chd8Q09XV5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd8Q09XV5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd8Q09XV5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chd8Q09XV5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
Chd8Q09XV5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Chd8Q09XV5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd8Q09XV5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.4■□□□□ 0.38
Chd8Q09XV5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd8Q09XV5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd8Q09XV5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd8Q09XV5 AW822252-206ENSMUST00000208904 237 ntBASIC17.4■□□□□ 0.38
Chd8Q09XV5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.4■□□□□ 0.38
Chd8Q09XV5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.4■□□□□ 0.38
Chd8Q09XV5 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd8Q09XV5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chd8Q09XV5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.39■□□□□ 0.38
Chd8Q09XV5 Gm43438-201ENSMUST00000198133 379 ntBASIC17.39■□□□□ 0.38
Chd8Q09XV5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chd8Q09XV5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd8Q09XV5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd8Q09XV5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd8Q09XV5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.39■□□□□ 0.37
Chd8Q09XV5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.39■□□□□ 0.37
Chd8Q09XV5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd8Q09XV5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Chd8Q09XV5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd8Q09XV5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd8Q09XV5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms