Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cux2P70298 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cux2P70298 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cux2P70298 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC32.05■■■□□ 2.72
Cux2P70298 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
Cux2P70298 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC32.05■■■□□ 2.72
Cux2P70298 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cux2P70298 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Cux2P70298 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cux2P70298 H2-K2-201ENSMUST00000174250 1049 ntBASIC32.04■■■□□ 2.72
Cux2P70298 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Cux2P70298 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Cux2P70298 Gm6802-201ENSMUST00000167843 1983 ntBASIC32.04■■■□□ 2.72
Cux2P70298 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Cux2P70298 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
Cux2P70298 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Cux2P70298 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC32.03■■■□□ 2.72
Cux2P70298 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Cux2P70298 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Cux2P70298 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Cux2P70298 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cux2P70298 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC32.02■■■□□ 2.72
Cux2P70298 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Cux2P70298 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cux2P70298 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cux2P70298 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Cux2P70298 AC163280.1-201ENSMUST00000228194 1100 ntBASIC32.01■■■□□ 2.72
Cux2P70298 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Cux2P70298 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Cux2P70298 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Cux2P70298 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cux2P70298 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cux2P70298 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cux2P70298 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Cux2P70298 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC32■■■□□ 2.71
Cux2P70298 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC32■■■□□ 2.71
Cux2P70298 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC32■■■□□ 2.71
Cux2P70298 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC32■■■□□ 2.71
Cux2P70298 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cux2P70298 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cux2P70298 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC31.99■■■□□ 2.71
Cux2P70298 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cux2P70298 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cux2P70298 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cux2P70298 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
Cux2P70298 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC31.98■■■□□ 2.71
Cux2P70298 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC31.98■■■□□ 2.71
Cux2P70298 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC31.98■■■□□ 2.71
Cux2P70298 Gm13158-201ENSMUST00000122007 736 ntBASIC31.98■■■□□ 2.71
Cux2P70298 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC31.98■■■□□ 2.71
Cux2P70298 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC31.98■■■□□ 2.71
Cux2P70298 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC31.98■■■□□ 2.71
Cux2P70298 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cux2P70298 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cux2P70298 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Cux2P70298 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cux2P70298 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cux2P70298 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cux2P70298 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
Cux2P70298 Gm10459-201ENSMUST00000202708 1155 ntBASIC31.97■■■□□ 2.71
Cux2P70298 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
Cux2P70298 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cux2P70298 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Cux2P70298 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Cux2P70298 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
Cux2P70298 Cdkn3-203ENSMUST00000227149 1952 ntBASIC31.96■■■□□ 2.71
Cux2P70298 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC31.95■■■□□ 2.71
Cux2P70298 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Cux2P70298 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
Cux2P70298 Gm26971-201ENSMUST00000182423 1072 ntBASIC31.95■■■□□ 2.71
Cux2P70298 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Cux2P70298 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Cux2P70298 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC31.95■■■□□ 2.7
Cux2P70298 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Cux2P70298 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
Cux2P70298 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Cux2P70298 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
Cux2P70298 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Cux2P70298 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Cux2P70298 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Cux2P70298 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC31.93■■■□□ 2.7
Cux2P70298 AC175538.1-201ENSMUST00000225343 1269 ntBASIC31.93■■■□□ 2.7
Cux2P70298 Gm15043-201ENSMUST00000118843 1543 ntBASIC31.93■■■□□ 2.7
Cux2P70298 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC31.93■■■□□ 2.7
Cux2P70298 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Cux2P70298 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC31.92■■■□□ 2.7
Cux2P70298 Gm21362-201ENSMUST00000194272 928 ntBASIC31.92■■■□□ 2.7
Cux2P70298 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
Cux2P70298 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Cux2P70298 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cux2P70298 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cux2P70298 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cux2P70298 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cux2P70298 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cux2P70298 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Cux2P70298 Gm5417-201ENSMUST00000079706 384 ntBASIC31.92■■■□□ 2.7
Cux2P70298 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cux2P70298 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cux2P70298 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cux2P70298 Gm8668-201ENSMUST00000120559 1447 ntBASIC31.91■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms