Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a1P61620 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sec61a1P61620 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sec61a1P61620 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.81■□□□□ 0.28
Sec61a1P61620 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sec61a1P61620 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sec61a1P61620 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.81■□□□□ 0.28
Sec61a1P61620 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sec61a1P61620 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Sec61a1P61620 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a1P61620 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a1P61620 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sec61a1P61620 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a1P61620 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a1P61620 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.8■□□□□ 0.28
Sec61a1P61620 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a1P61620 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.8■□□□□ 0.28
Sec61a1P61620 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a1P61620 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a1P61620 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Sec61a1P61620 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sec61a1P61620 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.79■□□□□ 0.28
Sec61a1P61620 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.79■□□□□ 0.28
Sec61a1P61620 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sec61a1P61620 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Rarb-207ENSMUST00000225921 2756 ntBASIC16.79■□□□□ 0.28
Sec61a1P61620 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sec61a1P61620 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Sec61a1P61620 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.78■□□□□ 0.28
Sec61a1P61620 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.78■□□□□ 0.28
Sec61a1P61620 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.78■□□□□ 0.28
Sec61a1P61620 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Sec61a1P61620 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sec61a1P61620 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sec61a1P61620 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sec61a1P61620 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a1P61620 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a1P61620 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a1P61620 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a1P61620 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a1P61620 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.77■□□□□ 0.28
Sec61a1P61620 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sec61a1P61620 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sec61a1P61620 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sec61a1P61620 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.77■□□□□ 0.27
Sec61a1P61620 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sec61a1P61620 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sec61a1P61620 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.76■□□□□ 0.27
Sec61a1P61620 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.76■□□□□ 0.27
Sec61a1P61620 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.76■□□□□ 0.27
Sec61a1P61620 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sec61a1P61620 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sec61a1P61620 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sec61a1P61620 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.75■□□□□ 0.27
Sec61a1P61620 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sec61a1P61620 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms