Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cpne2P59108 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.15■□□□□ 0.18
Cpne2P59108 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cpne2P59108 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.15■□□□□ 0.18
Cpne2P59108 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpne2P59108 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cpne2P59108 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Cpne2P59108 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cpne2P59108 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.14■□□□□ 0.17
Cpne2P59108 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cpne2P59108 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpne2P59108 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Cpne2P59108 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cpne2P59108 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne2P59108 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne2P59108 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cpne2P59108 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne2P59108 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne2P59108 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpne2P59108 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.12■□□□□ 0.17
Cpne2P59108 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cpne2P59108 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpne2P59108 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.11■□□□□ 0.17
Cpne2P59108 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cpne2P59108 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpne2P59108 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.1■□□□□ 0.17
Cpne2P59108 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne2P59108 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne2P59108 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cpne2P59108 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne2P59108 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne2P59108 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne2P59108 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne2P59108 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpne2P59108 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.09■□□□□ 0.17
Cpne2P59108 Gm7143-201ENSMUST00000222811 859 ntBASIC16.09■□□□□ 0.17
Cpne2P59108 Gm5812-201ENSMUST00000061073 957 ntBASIC16.09■□□□□ 0.17
Cpne2P59108 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.09■□□□□ 0.17
Cpne2P59108 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cpne2P59108 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpne2P59108 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cpne2P59108 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cpne2P59108 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms