Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp20P57748 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp20P57748 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp20P57748 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Mmp20P57748 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.15■■□□□ 1.14
Mmp20P57748 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp20P57748 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp20P57748 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Mmp20P57748 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.14■■□□□ 1.13
Mmp20P57748 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Mmp20P57748 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
Mmp20P57748 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Mmp20P57748 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Mmp20P57748 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Mmp20P57748 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Mmp20P57748 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
Mmp20P57748 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Mmp20P57748 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp20P57748 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.13■■□□□ 1.13
Mmp20P57748 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp20P57748 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp20P57748 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.13■■□□□ 1.13
Mmp20P57748 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Mmp20P57748 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.13■■□□□ 1.13
Mmp20P57748 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Mmp20P57748 Mir7071-201ENSMUST00000184847 69 ntBASIC22.13■■□□□ 1.13
Mmp20P57748 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp20P57748 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp20P57748 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp20P57748 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Mmp20P57748 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.13■■□□□ 1.13
Mmp20P57748 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.13■■□□□ 1.13
Mmp20P57748 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.12■■□□□ 1.13
Mmp20P57748 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
Mmp20P57748 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp20P57748 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp20P57748 Gm27275-201ENSMUST00000184318 272 ntBASIC22.12■■□□□ 1.13
Mmp20P57748 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC22.12■■□□□ 1.13
Mmp20P57748 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp20P57748 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Mmp20P57748 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Mmp20P57748 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.11■■□□□ 1.13
Mmp20P57748 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.11■■□□□ 1.13
Mmp20P57748 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.11■■□□□ 1.13
Mmp20P57748 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.11■■□□□ 1.13
Mmp20P57748 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22.11■■□□□ 1.13
Mmp20P57748 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Mmp20P57748 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.1■■□□□ 1.13
Mmp20P57748 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Mmp20P57748 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Mmp20P57748 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Mmp20P57748 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Mmp20P57748 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Mmp20P57748 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Mmp20P57748 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Mmp20P57748 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Mmp20P57748 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Mmp20P57748 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Mmp20P57748 Gm12896-201ENSMUST00000118430 226 ntBASIC22.09■■□□□ 1.13
Mmp20P57748 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Mmp20P57748 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Mmp20P57748 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Mmp20P57748 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Mmp20P57748 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Mmp20P57748 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Mmp20P57748 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Mmp20P57748 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.08■■□□□ 1.13
Mmp20P57748 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Mmp20P57748 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.08■■□□□ 1.13
Mmp20P57748 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Mmp20P57748 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Mmp20P57748 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Mmp20P57748 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.08■■□□□ 1.13
Mmp20P57748 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Mmp20P57748 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Mmp20P57748 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC22.07■■□□□ 1.12
Mmp20P57748 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Mmp20P57748 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Mmp20P57748 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Mmp20P57748 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Mmp20P57748 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Mmp20P57748 Mir6982-201ENSMUST00000184354 68 ntBASIC22.06■■□□□ 1.12
Mmp20P57748 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Mmp20P57748 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.06■■□□□ 1.12
Mmp20P57748 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Mmp20P57748 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Mmp20P57748 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Mmp20P57748 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Mmp20P57748 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.05■■□□□ 1.12
Mmp20P57748 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Mmp20P57748 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Mmp20P57748 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Mmp20P57748 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Mmp20P57748 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Mmp20P57748 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.04■■□□□ 1.12
Mmp20P57748 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Mmp20P57748 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Mmp20P57748 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Mmp20P57748 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Mmp20P57748 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms