Protein–RNA interactions for Protein: P56564

Slc1a3, Excitatory amino acid transporter 1, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a3P56564 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc1a3P56564 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.21■□□□□ 0.35
Slc1a3P56564 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slc1a3P56564 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc1a3P56564 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc1a3P56564 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.2■□□□□ 0.34
Slc1a3P56564 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Slc1a3P56564 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.2■□□□□ 0.34
Slc1a3P56564 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Slc1a3P56564 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc1a3P56564 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a3P56564 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a3P56564 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc1a3P56564 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc1a3P56564 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a3P56564 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a3P56564 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a3P56564 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.19■□□□□ 0.34
Slc1a3P56564 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a3P56564 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc1a3P56564 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.18■□□□□ 0.34
Slc1a3P56564 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a3P56564 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slc1a3P56564 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.18■□□□□ 0.34
Slc1a3P56564 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a3P56564 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.18■□□□□ 0.34
Slc1a3P56564 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a3P56564 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slc1a3P56564 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Slc1a3P56564 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.18■□□□□ 0.34
Slc1a3P56564 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a3P56564 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a3P56564 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a3P56564 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a3P56564 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc1a3P56564 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.17■□□□□ 0.34
Slc1a3P56564 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc1a3P56564 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Slc1a3P56564 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.17■□□□□ 0.34
Slc1a3P56564 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc1a3P56564 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Slc1a3P56564 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Slc1a3P56564 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Slc1a3P56564 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.16■□□□□ 0.34
Slc1a3P56564 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.16■□□□□ 0.34
Slc1a3P56564 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Slc1a3P56564 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc1a3P56564 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Slc1a3P56564 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a3P56564 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a3P56564 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a3P56564 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc1a3P56564 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc1a3P56564 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.15■□□□□ 0.34
Slc1a3P56564 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.15■□□□□ 0.34
Slc1a3P56564 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a3P56564 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc1a3P56564 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms