Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 GLC3YEL011W 2115 nt3.11□□□□□ -1.91
SSU72P53538 CDH1YGL003C 1701 nt3.11□□□□□ -1.91
SSU72P53538 ARO1YDR127W 4767 nt3.11□□□□□ -1.91
SSU72P53538 ISM1YPL040C 3009 nt3.11□□□□□ -1.91
SSU72P53538 DOS2YDR068W 933 nt3.11□□□□□ -1.91
SSU72P53538 HOM2YDR158W 1098 nt3.11□□□□□ -1.91
SSU72P53538 WBP1YEL002C 1293 nt3.11□□□□□ -1.91
SSU72P53538 tL(UAG)JtL(UAG)J 82 nt3.11□□□□□ -1.91
SSU72P53538 tL(UAG)L1tL(UAG)L1 82 nt3.11□□□□□ -1.91
SSU72P53538 tL(UAG)L2tL(UAG)L2 82 nt3.11□□□□□ -1.91
SSU72P53538 ARD1YHR013C 717 nt3.11□□□□□ -1.91
SSU72P53538 TIS11YLR136C 858 nt3.11□□□□□ -1.91
SSU72P53538 YLR154W-BYLR154W-B 165 nt3.11□□□□□ -1.91
SSU72P53538 YBL010CYBL010C 843 nt3.11□□□□□ -1.91
SSU72P53538 YLR462WYLR462W 609 nt3.11□□□□□ -1.91
SSU72P53538 GAC1YOR178C 2382 nt3.11□□□□□ -1.91
SSU72P53538 RNY1YPL123C 1305 nt3.11□□□□□ -1.91
SSU72P53538 DAP2YHR028C 2457 nt3.11□□□□□ -1.91
SSU72P53538 MDN1YLR106C 14733 nt3.11□□□□□ -1.91
SSU72P53538 DOA4YDR069C 2781 nt3.1□□□□□ -1.91
SSU72P53538 BCH1YMR237W 2175 nt3.1□□□□□ -1.91
SSU72P53538 DLS1YJL065C 504 nt3.1□□□□□ -1.91
SSU72P53538 RPS21BYJL136C 264 nt3.1□□□□□ -1.91
SSU72P53538 YLR326WYLR326W 723 nt3.1□□□□□ -1.91
SSU72P53538 RHO5YNL180C 996 nt3.1□□□□□ -1.91
SSU72P53538 YOR008W-BYOR008W-B 102 nt3.1□□□□□ -1.91
SSU72P53538 NOG1YPL093W 1944 nt3.1□□□□□ -1.91
SSU72P53538 YDR098C-AYDR098C-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YDR210C-CYDR210C-C 1323 nt3.1□□□□□ -1.91
SSU72P53538 YDR261C-CYDR261C-C 1323 nt3.1□□□□□ -1.91
SSU72P53538 YDR316W-AYDR316W-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YDR365W-AYDR365W-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YER137C-AYER137C-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YER159C-AYER159C-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YGR027W-AYGR027W-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YGR038C-AYGR038C-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YGR161C-CYGR161C-C 1323 nt3.1□□□□□ -1.91
SSU72P53538 YJR026WYJR026W 1323 nt3.1□□□□□ -1.91
SSU72P53538 YJR028WYJR028W 1323 nt3.1□□□□□ -1.91
SSU72P53538 YAR010CYAR010C 1323 nt3.1□□□□□ -1.91
SSU72P53538 YLR157C-AYLR157C-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YLR227W-AYLR227W-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YLR256W-AYLR256W-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YML040WYML040W 1323 nt3.1□□□□□ -1.91
SSU72P53538 YML045W-AYML045W-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YMR051CYMR051C 1323 nt3.1□□□□□ -1.91
SSU72P53538 YNL054W-AYNL054W-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YOL103W-AYOL103W-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YPL257W-AYPL257W-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YPR137C-AYPR137C-A 1323 nt3.1□□□□□ -1.91
SSU72P53538 YPR158C-CYPR158C-C 1323 nt3.1□□□□□ -1.91
SSU72P53538 PHO5YBR093C 1404 nt3.1□□□□□ -1.91
SSU72P53538 YHL012WYHL012W 1482 nt3.09□□□□□ -1.91
SSU72P53538 TDA3YHR009C 1572 nt3.09□□□□□ -1.91
SSU72P53538 STP2YHR006W 1626 nt3.09□□□□□ -1.91
SSU72P53538 YCR101CYCR101C 549 nt3.09□□□□□ -1.91
SSU72P53538 MED2YDL005C 1296 nt3.09□□□□□ -1.91
SSU72P53538 PRR2YDL214C 2100 nt3.09□□□□□ -1.91
SSU72P53538 MCM21YDR318W 1107 nt3.09□□□□□ -1.91
SSU72P53538 PHO92YDR374C 921 nt3.09□□□□□ -1.91
SSU72P53538 BUD16YEL029C 939 nt3.09□□□□□ -1.91
SSU72P53538 EDC1YGL222C 528 nt3.09□□□□□ -1.91
SSU72P53538 COS8YHL048W 1146 nt3.09□□□□□ -1.91
SSU72P53538 YAL064W-BYAL064W-B 381 nt3.09□□□□□ -1.91
SSU72P53538 YMR141CYMR141C 309 nt3.09□□□□□ -1.91
SSU72P53538 RRG9YNL213C 645 nt3.09□□□□□ -1.91
SSU72P53538 PEX11YOL147C 711 nt3.09□□□□□ -1.91
SSU72P53538 YBR053CYBR053C 1077 nt3.09□□□□□ -1.91
SSU72P53538 FRE4YNR060W 2160 nt3.09□□□□□ -1.91
SSU72P53538 PAF1YBR279W 1338 nt3.09□□□□□ -1.91
SSU72P53538 TRE2YOR256C 2430 nt3.09□□□□□ -1.92
SSU72P53538 TGL1YKL140W 1647 nt3.08□□□□□ -1.92
SSU72P53538 HAT2YEL056W 1206 nt3.08□□□□□ -1.92
SSU72P53538 YER165C-AYER165C-A 357 nt3.08□□□□□ -1.92
SSU72P53538 SEC53YFL045C 765 nt3.08□□□□□ -1.92
SSU72P53538 YGR051CYGR051C 324 nt3.08□□□□□ -1.92
SSU72P53538 YBL077WYBL077W 432 nt3.08□□□□□ -1.92
SSU72P53538 NDJ1YOL104C 1059 nt3.08□□□□□ -1.92
SSU72P53538 FES1YBR101C 873 nt3.08□□□□□ -1.92
SSU72P53538 YDR089WYDR089W 2610 nt3.08□□□□□ -1.92
SSU72P53538 CUS1YMR240C 1311 nt3.08□□□□□ -1.92
SSU72P53538 FBP26YJL155C 1359 nt3.08□□□□□ -1.92
SSU72P53538 SMC3YJL074C 3693 nt3.07□□□□□ -1.92
SSU72P53538 RTK1YDL025C 1863 nt3.07□□□□□ -1.92
SSU72P53538 MTR4YJL050W 3222 nt3.07□□□□□ -1.92
SSU72P53538 IRC22YEL001C 678 nt3.07□□□□□ -1.92
SSU72P53538 ERV29YGR284C 933 nt3.07□□□□□ -1.92
SSU72P53538 EMG1YLR186W 759 nt3.07□□□□□ -1.92
SSU72P53538 VPS28YPL065W 729 nt3.07□□□□□ -1.92
SSU72P53538 YPL168WYPL168W 1293 nt3.07□□□□□ -1.92
SSU72P53538 SPN1YPR133C 1233 nt3.07□□□□□ -1.92
SSU72P53538 PRS5YOL061W 1491 nt3.07□□□□□ -1.92
SSU72P53538 ARO9YHR137W 1542 nt3.07□□□□□ -1.92
SSU72P53538 ARG2YJL071W 1725 nt3.07□□□□□ -1.92
SSU72P53538 MSR1YHR091C 1932 nt3.07□□□□□ -1.92
SSU72P53538 YGL074CYGL074C 327 nt3.06□□□□□ -1.92
SSU72P53538 YGL101WYGL101W 648 nt3.06□□□□□ -1.92
SSU72P53538 YGL214WYGL214W 486 nt3.06□□□□□ -1.92
SSU72P53538 GTF1YGR102C 552 nt3.06□□□□□ -1.92
SSU72P53538 SPO16YHR153C 597 nt3.06□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms