Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a11P31650 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Slc6a11P31650 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a11P31650 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a11P31650 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a11P31650 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Slc6a11P31650 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a11P31650 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Slc6a11P31650 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a11P31650 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a11P31650 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Slc6a11P31650 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a11P31650 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Slc6a11P31650 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a11P31650 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
Slc6a11P31650 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.18■□□□□ 0.5
Slc6a11P31650 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a11P31650 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a11P31650 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc6a11P31650 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a11P31650 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a11P31650 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc6a11P31650 Gm5874-201ENSMUST00000096101 508 ntBASIC18.17■□□□□ 0.5
Slc6a11P31650 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.17■□□□□ 0.5
Slc6a11P31650 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a11P31650 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a11P31650 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a11P31650 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a11P31650 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.16■□□□□ 0.5
Slc6a11P31650 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a11P31650 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Slc6a11P31650 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a11P31650 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a11P31650 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a11P31650 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a11P31650 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Slc6a11P31650 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a11P31650 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Slc6a11P31650 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a11P31650 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a11P31650 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a11P31650 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a11P31650 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Slc6a11P31650 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a11P31650 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Slc6a11P31650 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 AA386476-201ENSMUST00000098781 1665 ntBASIC18.14■□□□□ 0.49
Slc6a11P31650 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.14■□□□□ 0.49
Slc6a11P31650 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a11P31650 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Slc6a11P31650 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a11P31650 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Slc6a11P31650 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.13■□□□□ 0.49
Slc6a11P31650 Gm8493-201ENSMUST00000196881 489 ntBASIC18.13■□□□□ 0.49
Slc6a11P31650 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a11P31650 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a11P31650 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a11P31650 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a11P31650 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a11P31650 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a11P31650 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a11P31650 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Slc6a11P31650 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.12■□□□□ 0.49
Slc6a11P31650 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a11P31650 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.12■□□□□ 0.49
Slc6a11P31650 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Slc6a11P31650 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Slc6a11P31650 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms