Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ApoeP08226 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.15■□□□□ 0.5
ApoeP08226 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.15■□□□□ 0.5
ApoeP08226 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.15■□□□□ 0.5
ApoeP08226 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ApoeP08226 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ApoeP08226 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.15■□□□□ 0.5
ApoeP08226 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ApoeP08226 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.15■□□□□ 0.5
ApoeP08226 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ApoeP08226 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ApoeP08226 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.15■□□□□ 0.5
ApoeP08226 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ApoeP08226 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.15■□□□□ 0.5
ApoeP08226 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.15■□□□□ 0.5
ApoeP08226 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ApoeP08226 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.14■□□□□ 0.5
ApoeP08226 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ApoeP08226 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.14■□□□□ 0.49
ApoeP08226 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ApoeP08226 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ApoeP08226 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ApoeP08226 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ApoeP08226 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ApoeP08226 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.14■□□□□ 0.49
ApoeP08226 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ApoeP08226 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ApoeP08226 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.14■□□□□ 0.49
ApoeP08226 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ApoeP08226 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ApoeP08226 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ApoeP08226 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ApoeP08226 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ApoeP08226 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.13■□□□□ 0.49
ApoeP08226 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ApoeP08226 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.13■□□□□ 0.49
ApoeP08226 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ApoeP08226 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ApoeP08226 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ApoeP08226 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ApoeP08226 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ApoeP08226 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ApoeP08226 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.12■□□□□ 0.49
ApoeP08226 Cap2-205ENSMUST00000225824 1634 ntBASIC18.12■□□□□ 0.49
ApoeP08226 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ApoeP08226 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ApoeP08226 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ApoeP08226 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ApoeP08226 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.12■□□□□ 0.49
ApoeP08226 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.12■□□□□ 0.49
ApoeP08226 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ApoeP08226 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.12■□□□□ 0.49
ApoeP08226 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ApoeP08226 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ApoeP08226 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ApoeP08226 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.11■□□□□ 0.49
ApoeP08226 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ApoeP08226 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.11■□□□□ 0.49
ApoeP08226 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ApoeP08226 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
ApoeP08226 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ApoeP08226 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ApoeP08226 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ApoeP08226 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ApoeP08226 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ApoeP08226 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ApoeP08226 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ApoeP08226 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ApoeP08226 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ApoeP08226 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ApoeP08226 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ApoeP08226 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ApoeP08226 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.09■□□□□ 0.49
ApoeP08226 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ApoeP08226 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.09■□□□□ 0.49
ApoeP08226 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.09■□□□□ 0.49
ApoeP08226 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.09■□□□□ 0.49
ApoeP08226 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.09■□□□□ 0.49
ApoeP08226 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ApoeP08226 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.09■□□□□ 0.49
ApoeP08226 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ApoeP08226 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ApoeP08226 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ApoeP08226 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ApoeP08226 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ApoeP08226 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ApoeP08226 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.08■□□□□ 0.49
ApoeP08226 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ApoeP08226 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms