Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Golph3-205ENSMUST00000228671 2842 ntBASIC17.78■□□□□ 0.44
Tgfb1P04202 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tgfb1P04202 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfb1P04202 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tgfb1P04202 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfb1P04202 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfb1P04202 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.78■□□□□ 0.44
Tgfb1P04202 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tgfb1P04202 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
Tgfb1P04202 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfb1P04202 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfb1P04202 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfb1P04202 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.77■□□□□ 0.44
Tgfb1P04202 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfb1P04202 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfb1P04202 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tgfb1P04202 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tgfb1P04202 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.76■□□□□ 0.43
Tgfb1P04202 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfb1P04202 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfb1P04202 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfb1P04202 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.76■□□□□ 0.43
Tgfb1P04202 Smad6-203ENSMUST00000179458 273 ntBASIC17.76■□□□□ 0.43
Tgfb1P04202 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.76■□□□□ 0.43
Tgfb1P04202 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.76■□□□□ 0.43
Tgfb1P04202 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfb1P04202 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfb1P04202 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfb1P04202 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfb1P04202 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tgfb1P04202 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.75■□□□□ 0.43
Tgfb1P04202 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.75■□□□□ 0.43
Tgfb1P04202 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.75■□□□□ 0.43
Tgfb1P04202 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tgfb1P04202 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tgfb1P04202 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Tgfb1P04202 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tgfb1P04202 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tgfb1P04202 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfb1P04202 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tgfb1P04202 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfb1P04202 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfb1P04202 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tgfb1P04202 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfb1P04202 Gm12821-201ENSMUST00000120022 600 ntBASIC17.73■□□□□ 0.43
Tgfb1P04202 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.73■□□□□ 0.43
Tgfb1P04202 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfb1P04202 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.73■□□□□ 0.43
Tgfb1P04202 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Tgfb1P04202 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tgfb1P04202 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfb1P04202 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tgfb1P04202 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.72■□□□□ 0.43
Tgfb1P04202 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Tgfb1P04202 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tgfb1P04202 Gm8493-201ENSMUST00000196881 489 ntBASIC17.72■□□□□ 0.43
Tgfb1P04202 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.72■□□□□ 0.43
Tgfb1P04202 Gm45417-201ENSMUST00000209533 758 ntBASIC17.72■□□□□ 0.43
Tgfb1P04202 Gm6139-201ENSMUST00000079261 882 ntBASIC17.72■□□□□ 0.43
Tgfb1P04202 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.72■□□□□ 0.43
Tgfb1P04202 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tgfb1P04202 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.71■□□□□ 0.43
Tgfb1P04202 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms