Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col4a1P02463 Gm22240-201ENSMUST00000175225 82 ntBASIC24.01■■□□□ 1.43
Col4a1P02463 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col4a1P02463 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Col4a1P02463 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24■■□□□ 1.43
Col4a1P02463 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col4a1P02463 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col4a1P02463 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC24■■□□□ 1.43
Col4a1P02463 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col4a1P02463 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Col4a1P02463 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Col4a1P02463 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col4a1P02463 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col4a1P02463 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Col4a1P02463 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.99■■□□□ 1.43
Col4a1P02463 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.99■■□□□ 1.43
Col4a1P02463 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Col4a1P02463 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col4a1P02463 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col4a1P02463 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col4a1P02463 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Col4a1P02463 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.99■■□□□ 1.43
Col4a1P02463 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Col4a1P02463 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Col4a1P02463 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.98■■□□□ 1.43
Col4a1P02463 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.98■■□□□ 1.43
Col4a1P02463 Trmt13-210ENSMUST00000198454 880 ntBASIC23.98■■□□□ 1.43
Col4a1P02463 Gm44878-201ENSMUST00000205812 1295 ntBASIC23.98■■□□□ 1.43
Col4a1P02463 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Col4a1P02463 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Col4a1P02463 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Col4a1P02463 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Col4a1P02463 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col4a1P02463 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col4a1P02463 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Col4a1P02463 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Col4a1P02463 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col4a1P02463 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col4a1P02463 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Col4a1P02463 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col4a1P02463 Rab3c-203ENSMUST00000224180 967 ntBASIC23.96■■□□□ 1.43
Col4a1P02463 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col4a1P02463 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col4a1P02463 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Col4a1P02463 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Col4a1P02463 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.95■■□□□ 1.43
Col4a1P02463 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC23.95■■□□□ 1.43
Col4a1P02463 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.95■■□□□ 1.43
Col4a1P02463 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col4a1P02463 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col4a1P02463 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Col4a1P02463 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col4a1P02463 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Col4a1P02463 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Col4a1P02463 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Col4a1P02463 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col4a1P02463 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Col4a1P02463 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col4a1P02463 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Col4a1P02463 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col4a1P02463 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.93■■□□□ 1.42
Col4a1P02463 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Col4a1P02463 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Col4a1P02463 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Col4a1P02463 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Col4a1P02463 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.92■■□□□ 1.42
Col4a1P02463 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col4a1P02463 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col4a1P02463 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Col4a1P02463 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.92■■□□□ 1.42
Col4a1P02463 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.92■■□□□ 1.42
Col4a1P02463 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col4a1P02463 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Col4a1P02463 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC23.91■■□□□ 1.42
Col4a1P02463 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Col4a1P02463 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col4a1P02463 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col4a1P02463 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col4a1P02463 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC23.91■■□□□ 1.42
Col4a1P02463 Gm8520-201ENSMUST00000186517 868 ntBASIC23.91■■□□□ 1.42
Col4a1P02463 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.91■■□□□ 1.42
Col4a1P02463 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col4a1P02463 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Col4a1P02463 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC23.9■■□□□ 1.42
Col4a1P02463 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col4a1P02463 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col4a1P02463 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Col4a1P02463 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col4a1P02463 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
Col4a1P02463 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col4a1P02463 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Col4a1P02463 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.89■■□□□ 1.42
Col4a1P02463 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Col4a1P02463 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Col4a1P02463 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.89■■□□□ 1.41
Col4a1P02463 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Col4a1P02463 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col4a1P02463 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col4a1P02463 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col4a1P02463 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms