Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hcn3O88705 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hcn3O88705 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.37■□□□□ 0.53
Hcn3O88705 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Hcn3O88705 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcn3O88705 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hcn3O88705 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.36■□□□□ 0.53
Hcn3O88705 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.36■□□□□ 0.53
Hcn3O88705 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.36■□□□□ 0.53
Hcn3O88705 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.36■□□□□ 0.53
Hcn3O88705 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hcn3O88705 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.35■□□□□ 0.53
Hcn3O88705 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hcn3O88705 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcn3O88705 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hcn3O88705 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn3O88705 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn3O88705 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn3O88705 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn3O88705 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.34■□□□□ 0.53
Hcn3O88705 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.34■□□□□ 0.53
Hcn3O88705 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn3O88705 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn3O88705 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn3O88705 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.34■□□□□ 0.53
Hcn3O88705 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcn3O88705 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hcn3O88705 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcn3O88705 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcn3O88705 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcn3O88705 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcn3O88705 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.33■□□□□ 0.52
Hcn3O88705 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.33■□□□□ 0.52
Hcn3O88705 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hcn3O88705 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hcn3O88705 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hcn3O88705 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn3O88705 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn3O88705 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn3O88705 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn3O88705 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn3O88705 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hcn3O88705 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn3O88705 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn3O88705 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hcn3O88705 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn3O88705 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn3O88705 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn3O88705 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn3O88705 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.31■□□□□ 0.52
Hcn3O88705 Mir6236-201ENSMUST00000184437 123 ntBASIC18.31■□□□□ 0.52
Hcn3O88705 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.31■□□□□ 0.52
Hcn3O88705 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcn3O88705 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.31■□□□□ 0.52
Hcn3O88705 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hcn3O88705 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.31■□□□□ 0.52
Hcn3O88705 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hcn3O88705 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn3O88705 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn3O88705 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn3O88705 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn3O88705 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.3■□□□□ 0.52
Hcn3O88705 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn3O88705 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcn3O88705 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.29■□□□□ 0.52
Hcn3O88705 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcn3O88705 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcn3O88705 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms