Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a20bO88575 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.11■□□□□ 0.97
Slc6a20bO88575 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Slc6a20bO88575 Dio3-201ENSMUST00000097228 1449 ntBASIC21.11■□□□□ 0.97
Slc6a20bO88575 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Slc6a20bO88575 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Slc6a20bO88575 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.1■□□□□ 0.97
Slc6a20bO88575 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Slc6a20bO88575 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.1■□□□□ 0.97
Slc6a20bO88575 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a20bO88575 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a20bO88575 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Slc6a20bO88575 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Slc6a20bO88575 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a20bO88575 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a20bO88575 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Slc6a20bO88575 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.09■□□□□ 0.97
Slc6a20bO88575 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Slc6a20bO88575 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Slc6a20bO88575 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a20bO88575 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc6a20bO88575 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.08■□□□□ 0.97
Slc6a20bO88575 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a20bO88575 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.08■□□□□ 0.97
Slc6a20bO88575 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc6a20bO88575 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Slc6a20bO88575 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a20bO88575 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a20bO88575 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Slc6a20bO88575 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.07■□□□□ 0.96
Slc6a20bO88575 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.07■□□□□ 0.96
Slc6a20bO88575 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Slc6a20bO88575 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Slc6a20bO88575 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.05■□□□□ 0.96
Slc6a20bO88575 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Gm10698-201ENSMUST00000182663 604 ntBASIC21.05■□□□□ 0.96
Slc6a20bO88575 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Slc6a20bO88575 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Slc6a20bO88575 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.04■□□□□ 0.96
Slc6a20bO88575 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a20bO88575 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a20bO88575 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Slc6a20bO88575 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.03■□□□□ 0.96
Slc6a20bO88575 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Slc6a20bO88575 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a20bO88575 Gm11249-201ENSMUST00000117071 859 ntBASIC21.02■□□□□ 0.96
Slc6a20bO88575 Gm37055-201ENSMUST00000191866 133 ntBASIC21.02■□□□□ 0.96
Slc6a20bO88575 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a20bO88575 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.02■□□□□ 0.96
Slc6a20bO88575 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Slc6a20bO88575 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Slc6a20bO88575 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Slc6a20bO88575 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms